SCTrack.track module

SCTrack.track.start_track(fannotation: str | dict, fout, basename, track_range=None, fimage=None, fbf=None, export_visualization=True, track_to_json=True)

Parameters:

• track_range – Track frame number range

• visualize_background_image – track background image

• basename –

• fannotation – segmentation output result, json file or dict

• fout – Tracking output folder path

• fimage – raw image path, can be empty

• fbf – Bright field image path, can be empty

• export_visualization – Whether to export the tracking visualization file, if yes, it will export a multi-frame tif file

• track_to_json – Whether to write the tracking result into fjson, if yes, a new json file will be generated

Returns:

None