SCTrack

• SCTrack package
  • Submodules
    • SCTrack.base module
      • Cell
      • CellStatus
      • MatchStatus
      • NoneTypeFilter()
      • Rectangle
      • SingleInstance
      • TreeStatus
      • Vector
      • warningFilter()
    • SCTrack.config module
    • SCTrack.feature module
      • Feature
      • FeatureExtractor
      • Mask
      • feature_extract()
      • get_frame_by_index()
      • imread()
    • SCTrack.generate_tracking_stack module
      • JsonParser
      • Mask
      • RefinedParser
      • Stack
      • coord2counter()
      • coordinate2mask()
      • csv2mask()
      • extractRoiFromImg()
      • link()
    • SCTrack.prepare module
      • DetectionParser
      • convert_dtype()
      • draw_bbox()
      • json2box()
    • SCTrack.reclassification module
      • TreeParser
      • find_combinations_objects()
      • pares_single_tree()
      • paste()
      • relink_tree()
      • run()
      • run_track()
      • track_tree_to_TRA()
      • track_tree_to_mask()
      • track_tree_to_table()
      • track_trees_to_json()
    • SCTrack.sctrack module
      • main()
    • SCTrack.t_error module
      • ErrorMatchMitosis
      • InsertError
      • MatchFailed
      • MitosisError
      • NodeExistError
      • StatusError
    • SCTrack.template module
    • SCTrack.track module
      • start_track()
    • SCTrack.tracker module
      • CellNode
      • Checker
      • Match
      • Matcher
      • Tracker
      • TrackingTree
      • get_cell_line_from_tree()
    • SCTrack.utils module
      • convert_dtype()
      • mask_seq_to_json()
      • mask_tif_to_json()
      • mask_to_coords()
      • mask_to_json()
      • readTif()
      • tif2png()
      • time_it()
  • Module contents